DNBSEQ-G400 paired end sequencing of SAMD00647306 - SRA

DRX489538: DNBSEQ-G400 paired end sequencing of SAMD00647306
1 DNBSEQ (DNBSEQ-G400) run: 21.5M spots, 6.5G bases, 4.4Gb downloads

Submitted by: RIKEN_CSRS

Study: Transcriptome, Metabolome, and Hormonome Analyses of Rice Calli

PRJDB16708 • DRP012054 • All experiments • All runs

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We conducted multiomics studies on cultivated rice (Oryza sativa ssp. japonica) calli at various timepoints and culture conditions.

Sample: h_Os_4wk3

SAMD00647306 • DRS407569 • All experiments • All runs

Organism: Oryza sativa Japonica Group

Library:

Name: h_Os_4wk3

Instrument: DNBSEQ-G400

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: Oligo-dT

Layout: PAIRED

Construction protocol: RNA was harvested using Rneasy mini plus kit (Qiagen). 2~5 ug of total RNA was used for the construction of sequencing libraries. RNA libraries for RNA-seq were prepared using NEXTflex Rapid Directional RNA-seq kit (v2.0; PerkinElmer) following manufacturer's protocols.

Runs: 1 run, 21.5M spots, 6.5G bases, 4.4Gb

Run	# of Spots	# of Bases	Size	Published
DRR505628	21,523,644	6.5G	4.4Gb	2024-09-25

ID:: 35358867

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